SubtiBank SubtiBank
yjbB [2019-06-07 10:00:13]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yjbB [2019-06-07 10:00:13]

similar to macrolide-efflux transporter
locus
BSU11480
pI
8.57
mw
43.69 kDa
protein length
405 aa Sequence Blast
gene length
1218 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.12|Other transporters]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.14|Resistance against toxins/ antibiotics/ based on similarity]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    1,225,557 1,226,774

    The protein

    Protein family

  • [SW|major facilitator superfamily] (according to UniProt)

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Biological materials

    Mutant

  • MGNA-B293 (yjbB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1292 NBRP B. subtilis, Japan]
  • BKE11480 ([gene|122F9AA09E54AA612C7CDFD62F0635BE710152A0|yjbB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE11480 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATCGTATTTCGCCTCCGCT, downstream forward: _UP4_TGAGAAACACTTCAAAATGA
  • BKK11480 ([gene|122F9AA09E54AA612C7CDFD62F0635BE710152A0|yjbB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK11480 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATCGTATTTCGCCTCCGCT, downstream forward: _UP4_TGAGAAACACTTCAAAATGA